Items where Author is "Steane, DA"

Ahrens, CW, Jordan, R, Bragg, J, Harrison, PA

, Hopley, T, Bothwell, H, Murray, K, Steane, DA

, Whale, JW, Byrne, M, Andrew, R and Rymer, PD 2021 , 'Regarding the F-word: The effects of data filtering on inferred genotype-environment associations' , Molecular Ecology Resources , pp. 1-15 , doi: https://doi.org/10.1111/1755-0998.13351.

Ahrens, CW, Jordan, R, Bragg, J, Harrison, PA

, Hopley, T, Bothwell, H, Murray, K, Steane, DA

, Whale, JW, Byrne, M, Andrew, R and Rymer, PD 2021 , 'Regarding the F-word: The effects of data filtering on inferred genotype-environment associations' , Molecular Ecology Resources , pp. 1-15 , doi: https://doi.org/10.1111/1755-0998.13351.

Barbour, RC, Forster, LG, Baker, SC, Steane, DA and Potts, BM 2009 , 'Biodiversity consequences of genetic variation in bark characteristics within a foundation tree species' , Conservation Biology, vol. 23, no. 5 , pp. 1146-1155 , doi: https://doi.org/10.1111/j.1523-1739.2009.01247.x.

Barbour, RC, Forster, LG, Baker, SC, Steane, DA and Potts, BM 2009 , 'Biodiversity consequences of genetic variation in bark characteristics within a foundation tree species' , Conservation Biology , doi: https://doi.org/10.1111/j.1523-1739.2009.01247.x.

Barbour, RC, O'Reilly-Wapstra, J

, De Little, DW, Jordan, GJ, Steane, DA, Humphreys, JR, Bailey, JK, Whitham, TG and Potts, BM 2009 , 'A geographic mosaic of genetic variation within a foundation tree species and its community-level consequences' , Ecology, vol. 90, no. 7 , pp. 1762-1772 , doi: https://doi.org/10.1890/08-0951.1.

Binks, RM, Steane, DA

and Byrne, M 2021 , 'Genomic divergence in sympatry indicates strong reproductive barriers and cryptic species within Eucalyptus salubris' , Ecology and Evolution, vol. 11, no. 10 , pp. 5096-5110 , doi: https://doi.org/10.1002/ece3.7403.

Binks, RM, Steane, DA

and Byrne, M 2021 , 'Genomic divergence in sympatry indicates strong reproductive barriers and cryptic species within Eucalyptus salubris' , Ecology and Evolution, vol. 11, no. 10 , pp. 5096-5110 , doi: https://doi.org/10.1002/ece3.7403.

Bloomfield, JA, Nevill, P, Potts, BM, Vaillancourt, RE and Steane, DA 2011 , 'Molecular genetic variation in a widespread forest tree species Eucalyptus obliqua (Myrtaceae) on the island of Tasmania' , Australian Journal of Botany, vol. 59, no. 3 , pp. 226-237 , doi: https://doi.org/10.1071/BT10315.

Breed, MF, Harrison, PA

, Blyth, C, Byrne, M, Gaget, V, Gellie, NJC, Groom, SVC, Hodgson, R, Mills, JG, Prowse, TAA, Steane, DA

and Mohr, JJ 2019 , 'The potential of genomics for restoring ecosystems and biodiversity' , Nature Reviews Genetics, vol. 20, no. 10 , pp. 615-628 , doi: https://doi.org/10.1038/s41576-019-0152-0.

Breed, MF, Harrison, PA

, Blyth, C, Byrne, M, Gaget, V, Gellie, NJC, Groom, SVC, Hodgson, R, Mills, JG, Prowse, TAA, Steane, DA

and Mohr, JJ 2019 , 'The potential of genomics for restoring ecosystems and biodiversity' , Nature Reviews Genetics, vol. 20, no. 10 , pp. 615-628 , doi: https://doi.org/10.1038/s41576-019-0152-0.

Butler, JB

, Harrison, PA

, Vaillancourt, RE

, Steane, DA

, Tibbits, JFG and Potts, BM

2022 , 'Climate adaptation, drought susceptibility, and genomic-informed predictions of future climate refugia for the Australian forest tree Eucalyptus globulus' , Forests, vol. 13, no. 4 , doi: https://doi.org/10.3390/f13040575.

Byrne, M, Steane, DA, Joseph, LJ, Yeates, DK, Jordan, GJ, Crayn, DM, Aplin, K, Cantrill, DJ, Cook, LG, Crisp, MD, Keogh, S, Melville, J, Moritz, C, Porch, N, Sniderman, JMK, Sunnucks, P and Weston, PH 2011 , 'Decline of a biome: evolution, contraction, fragmentation, extinction and invasion of the Australian mesic zone biota' , Journal of Biogeography, vol. 38 , pp. 1635-1656 , doi: https://doi.org/10.1111/j.1365-2699.2011.02535.x.

Caddy-Retalic, S, Andersen, AN, Aspinwall, MJ, Breed, MF, Byrne, M, Christmas, MJ, Dong, N, Evans, BJ, Fordham, DA, Guerin, GR, Hoffmann, AA, Hughes, AC, van Leeuwen, SJ, McInerney, FA

, Prober, SM, Rossetto, M, Rymer, PD, Steane, DA

, Wardle, GM and Lowe, AJ 2017 , 'Bioclimatic transect networks: powerful observatories of ecological change' , Ecology and Evolution, vol. 7, no. 13 , pp. 4607-4619 , doi: https://doi.org/10.1002/ece3.2995.

Caddy-Retalic, S, Andersen, AN, Aspinwall, MJ, Breed, MF, Byrne, M, Christmas, MJ, Dong, N, Evans, BJ, Fordham, DA, Guerin, GR, Hoffmann, AA, Hughes, AC, van Leeuwen, SJ, McInerney, FA

, Prober, SM, Rossetto, M, Rymer, PD, Steane, DA

, Wardle, GM and Lowe, AJ 2017 , 'Bioclimatic transect networks: powerful observatories of ecological change' , Ecology and Evolution, vol. 7, no. 13 , pp. 4607-4619 , doi: https://doi.org/10.1002/ece3.2995.

Costa, J, Vaillancourt, RE

, Steane, DA

, Jones, RC

and Marques, C 2017 , 'Microsatellite analysis of population structure in Eucalyptus globulus' , Genome, vol. 60, no. 9 , pp. 1-8 , doi: https://doi.org/10.1139/gen-2016-0218.

Crisp, MD, Cook, Lynn and Steane, DA 2004 , 'Radiation of the Australian flora: what can comparisons of molecular phylogenies across multiple taxa tell us about the evolution of diversity in present-day communities?' , Philosophical Transactions of the Royal Society Series B Biological Sciences, vol. 359, no. 1450 , pp. 1551-1571 , doi: https://doi.org/10.1098/rstb.2004.1528.

Foster, SA, McKinnon, GE, Steane, DA, Potts, BM and Vaillancourt, RE 2007 , 'Parallel evolution of dwarf ecotypes in the forest tree Eucalyptus globulus' , New Phytologist, vol. 175 , pp. 370-380 .

Foster, SA, McKinnon, GE, Steane, DA, Potts, BM and Vaillancourt, RE 2007 , 'Parallel evolution of dwarf ecotypes in the forest tree Eucalyptus globulus' , New Phytologist, vol. 175, no. 2 , pp. 370-380 , doi: https://doi.org/10.1111/j.1469-8137.2007.02077.x.

Freeman, JS, Jackson, HD, Steane, DA, McKinnon, GE, Potts, BM and Vaillancourt, RE 2001 , 'Chloroplast DNA phylogeography of Eucalyptus globulus' , Australian Journal of Botany, vol. 49, no. 5 , pp. 585-596 , doi: https://doi.org/10.1071/BT00094.

Jackson, HD, Steane, DA, Potts, BM and Vaillancourt, RE 1999 , 'Chloroplast DNA evidence for reticulate evolution in Eucalyptus (Myrtaceae)' , Molecular Ecology, vol. 8, no. 5 , pp. 739-751 , doi: https://doi.org/10.1046/j.1365-294X.1999.00614.x.

Janes, JK, Vaillancourt, RE and Steane, DA 2008 , 'The occurrence and conservation status of Tasmanian Pterostylis (Orchidaceae)' , Tasmanian Naturalist, vol. 130 , pp. 86-99 .

Janes, JK, Steane, DA and Vaillancourt, RE 2010 , 'An investigation into the ecological requirements and niche partitioning of Pterostylidinae (Orchidaceae) species' , Australian Journal of Botany, vol. 58, no. 5 , pp. 335-341 , doi: https://doi.org/10.1071/BT10041.

Janes, JK, Steane, DA, Vaillancourt, RE and Duretto, MF 2010 , 'A molecular phylogeny of the subtribe Pterostylidinae (Orchidaceae): resolving the taxonomic confusion' , Australian Systematic Botany, vol. 23, no. 4 , pp. 248-259 , doi: https://doi.org/10.1071/SB10006.

Jones, RC, Steane, DA, Potts, BM and Vaillancourt, RE 2002 , 'Microsatellite and morphological analysis of Eucalyptus globulus populations' , Canadian Journal of Forest Research, vol. 32, no. 1 , pp. 59-66 , doi: https://doi.org/10.1139/x01-172.

Jones, TH, Steane, DA, Jones, RC, Pilbeam, D, Vaillancourt, RE and Potts, BM 2006 , 'Effects of domestication on genetic diversity in Eucalyptus globulus' , Forest Ecology and Management, vol. 234, no. 1-3 , pp. 78-84 , doi: https://doi.org/10.1016/j.foreco.2006.06.021.

McKinnon, GE, Jordan, GJ, Vaillancourt, RE, Steane, DA and Potts, BM 2004 , 'Glacial refugia and reticulate evolution: the case of the Tasmanian eucalypts' , Philosophical Transactions of the Royal Society Series B Biological Sciences, vol. 359, no. 1442 , pp. 275-284 , doi: https://doi.org/10.1098/rstb.2003.1391.

McKinnon, GE, Potts, BM, Steane, DA and Vaillancourt, RE 2005 , 'Population and phylogenetic analysis of the cinnamoyl coA reductase gene in Eucalyptus globulus (Myrtaceae)' , Australian Journal of Botany, vol. 53, no. 8 , pp. 827-838 , doi: https://doi.org/10.1071/BT04195.

McKinnon, GE, Steane, DA, Potts, BM and Vaillancourt, RE 1999 , 'Incongruence between chloroplast and species phylogenies in eucalyptus subgenus monocalyptus (Myrtaceae)' , American Journal of Botany, vol. 86, no. 7 , pp. 1038-1046 .

McKinnon, GE, Vaillancourt, RE, Steane, DA and Potts, BM 2008 , 'An AFLP marker approach to lower-level systematics in Eucalyptus (Myrtaceae)' , American Journal of Botany, vol. 95, no. 3 , pp. 368-380 .

McKinnon, GE, Vaillancourt, RE, Steane, DA and Potts, BM 2004 , 'The rare silver gum, Eucalyptus cordata , is leaving its trace in the organellar gene pool of Eucalyptus globulus' , Molecular Ecology, vol. 13, no. 12 , pp. 3751-3762 , doi: https://doi.org/10.1111/j.1365-294X.2004.02364.x.

McKinnon, GE, Steane, DA, Potts, BM and Vaillancourt, RE 1999 , 'Incongruence between chloroplast and species phylogenies in Eucalyptus subgenus Monocalyptus (Myrtaceae)' , American Journal of Botany, vol. 86 , pp. 1038-1046 .

Ochieng, JW, Henry, RJ, Baverstock, PR, Steane, DA and Shepherd, M 2007 , 'Nuclear ribosomal pseudogenes resolve a corroborated monophyly of the eucalypt genus Corymbia despite misleading hypotheses at functional ITS paralogs' , Molecular Phylogenetics and Evolution, vol. 44, no. 2 , pp. 752-764 , doi: https://doi.org/10.1016/j.ympev.2007.04.017.

Ochieng, JW, Steane, DA, Ladiges, PY, Baverstock, PR, Henry, RJ and Shepherd, M 2007 , 'Microsatellites retain phylogenetic signals across genera in eucalypts (Myrtaceae)' , Genetics and Molecular Biology, vol. 30, no. 4 , pp. 1125-1134 .

Othman, RNA, Jordan, GJ, Worth, JRP, Steane, DA and Duretto, MF 2010 , 'Phylogeny and infrageneric classification of Correa Andrews (Rutaceae) on the basis of nuclear and chloroplast DNA' , Plant Systematics and Evolution, vol. 288, no. 3-4 , pp. 127-138 , doi: https://doi.org/10.1007/s00606-010-0315-0.

Pfeilsticker, TR, Jones, RC

, Steane, DA

, Harrison, PA

, Vaillancourt, RE

and Potts, BM

2021 , 'Expansion of the rare Eucalyptus risdonii under climate change through hybridization with a closely related species despite hybrid inferiority' , Annals of Botany, vol. 129, no. 1 , pp. 1-14 , doi: https://doi.org/10.1093/aob/mcab103.

Poke, FS, Martin, DP, Steane, DA, Vaillancourt, RE and Reid, JB 2006 , 'The impact of intragenic recombination on phylogenetic reconstruction at the sectional level in Eucalyptus when using a single copy nuclear gene (cinnamoyl CoA reductase)' , Molecular Phylogenetics and Evolution, vol. 39, no. 1 , pp. 160-170 , doi: https://doi.org/10.1016/j.ympev.2005.11.016.

Rathbone, DA, McKinnon, GE, Potts, BM, Steane, DA and Vaillancourt, RE 2007 , 'Microsatellite and cpDNA variation in island and mainland populations of a regionally rare eucalypt, Eucalyptus perriniana (Myrtaceae)' , Australian Journal of Botany, vol. 55 , pp. 513-520 .

Rathbone, DA, McKinnon, GE, Potts, BM, Steane, DA and Vaillancourt, RE 2007 , 'Microsatellite and cpDNA variation in island and mainland populations of a regionally rare eucalypt, Eucalyptus perriniana (Myrtaceae)' , Australian Journal of Botany, vol. 55 , pp. 513-520 , doi: https://doi.org/10.1071/BT06203.

Rathbone, DA, McKinnon, GE, Potts, BM, Steane, DA and Vaillancourt, RE 2007 , 'Microsatellite and cpDNA variation in island and mainland populations of a regionally rare eucalypt,Eucalyptus perriniana (Myrtaceae)' , Australian Journal of Botany, vol. 55 , pp. 513-520 .

Sansaloni, CP, Petroli, CD, Carling, J, Hudson, CJ, Steane, DA, Myburg, AA, Grattapaglia, D, Vaillancourt, RE and Kilian, A 2010 , 'A high-density Diversity Arrays Technology (DArT) microarray for genome-wide genotyping in Eucalyptus.' , Plant Methods, vol. 6, no. 16 , doi: https://doi.org/10.1186/1746-4811-6-16.

Steane, DA, Nicolle, D and Potts, BM 2007 , 'Phylogenetic positioning of anomalous eucalypts by using ITS sequence data' , Australian Systematic Botany, vol. 20 , pp. 402-408 .

Steane, DA, de Kok, RPJ and Olmstead, RG 2004 , 'Phylogenetic relationships between Clerodendrum (Lamiaceae) and other Ajugoid genera inferred from nuclear and chloroplast DNA sequence data' , Molecular Phylogenetics and Evolution, vol. 32, no. 1 , pp. 39-45 , doi: https://doi.org/10.1016/j.ympev.2003.11.011.

Steane, DA 2005 , 'Complete nucleotide sequence of the chloroplast genome from the Tasmanian Blue Gum, Eucalyptus globulus (Myrtaceae)' , DNA Research, vol. 12, no. 3 , pp. 215-220 , doi: https://doi.org/10.1093/dnares/dsi006.

Steane, DA, Byrne, M, Vaillancourt, RE and Potts, BM 1998 , 'Chloroplast DNA polymorphism signals complex interspecific interactions in Eucalyptus (Myrtaceae)' , Australian Systematic Botany, vol. 11, no. 1 , pp. 25-40 , doi: https://doi.org/10.1071/SB96028.

Steane, DA, Byrne, M, Vaillancourt, RE and Potts, BM 1998 , 'Complex interspecific interactions in Eucalyptus: evidence from the chloroplast' , Australian Biologist, vol. 11, no. 1 , pp. 39-46 .

Steane, DA, Conod, N, Jones, RC, Vaillancourt, RE and Potts, BM 2006 , 'A comparative analysis of population structure of a forest tree, Eucalyptus globulus (Myrtaceae), using microsatellite markers and quantitative traits' , Tree Genetics and Genomes, vol. 2, no. 1 , pp. 30-38 , doi: https://doi.org/10.1007/s11295-005-0028-7.

Steane, DA, Jones, RC and Vaillancourt, RE 2005 , 'A set of chloroplast microsatellite primers for Eucalyptus (Myrtaceae)' , Molecular Ecology Notes, vol. 5, no. 3 , pp. 538-541 , doi: https://doi.org/10.1111/j.1471-8286.2005.00981.x.

Steane, DA, McKinnon, GE, Vaillancourt, RE and Potts, BM 1999 , 'ITS sequence data resolve higher level relationships among the eucalypts' , Molecular Phylogenetics and Evolution, vol. 12, no. 2 , pp. 215-223 , doi: https://doi.org/10.1006/mpev.1999.0612.

Steane, DA, Nicolle, D, McKinnon, GE, Vaillancourt, RE and Potts, BM 2002 , 'Higher-level relationships among the eucalypts are resolved by ITS-sequence data' , Australian Systematic Botany, vol. 15, no. 1 , pp. 49-62 , doi: https://doi.org/10.1071/SB00039.

Steane, DA, Nicolle, D and Potts, BM 2007 , 'Phylogenetic positioning of anomalous eucalypts by using ITS sequence data' , Australian Systematic Botany, vol. 20, no. 5 , pp. 402-408 , doi: https://doi.org/10.1071/SB07013.

Steane, DA, Nicolle, D, Sansaloni, CP, Petroli, CD, Carling, J, Kilian, A, Myburg, AA, Grattapaglia, D and Vaillancourt, RE 2011 , 'Population genetic analysis and phylogeny reconstruction in Eucalyptus (Myrtaceae) using high-throughput, genome-wide genotyping' , Molecular Phylogenetics and Evolution, vol. 59, no. 1 , pp. 206-224 , doi: https://doi.org/10.1016/j.ympev.2011.02.003.

Steane, DA, Scotland, RW, Mabberley, DJ and Olmstead, RG 1999 , 'Molecular systematics of Clerodendrum (Lamiaceae): ITS sequences and total evidence' , American Journal of Botany, vol. 86, no. 1 , pp. 98-107 .

Steane, DA, Vaillancourt, RE, Russell, J, Powell, W, Marshall, D and Potts, BM 2001 , 'Development and characterisation of microsatellite loci in Eucalyptus globulus (Myrtaceae)' , Silvae Genetica, vol. 50, no. 2 , pp. 89-91 .

Steane, DA, West, AK, Potts, BM, Ovenden, JR and Reid, JB 1991 , 'Restriction fragment length polymorphisms in chloroplast DNA from six species of eucalyptus' , Australian Journal of Botany, vol. 39, no. 5 , pp. 399-414 , doi: https://doi.org/10.1071/BT9910399.

Steane, DA, Wilson, KL and Hill, RS 2003 , 'Using matK sequence data to unravel the phylogeny of Casuarinaceae' , Molecular Phylogenetics and Evolution, vol. 28, no. 1 , pp. 47-59 , doi: https://doi.org/10.1016/S1055-7903(03)00028-9.

Steane, DA

, McLean, EH, Potts, BM

, Prober, SM, Stock, WD, Stylianou, VM, Vaillancourt, RE

and Byrne, M 2017 , 'Evidence for adaptation and acclimation in a widespread eucalypt of semi-arid Australia' , Biological Journal of the Linnean Society, vol. 121, no. 3 , pp. 484-500 , doi: https://doi.org/10.1093/biolinnean/blw051.

Steane, DA

, McLean, EH, Potts, BM

, Prober, SM, Stock, WD, Stylianou, VM, Vaillancourt, RE

and Byrne, M 2017 , 'Evidence for adaptation and acclimation in a widespread eucalypt of semi-arid Australia' , Biological Journal of the Linnean Society, vol. 121, no. 3 , pp. 484-500 , doi: https://doi.org/10.1093/biolinnean/blw051.

Steane, DA

, Potts, BM

, McLean, EH, Collins, L, Holland, BR

, Prober, SM, Stock, WD, Vaillancourt, RE

and Byrne, M 2017 , 'Genomic scans across three eucalypts suggest that adaptation to aridity is a genome-wide phenomenon' , Genome Biology and Evolution, vol. 9, no. 2 , pp. 253-265 , doi: https://doi.org/10.1093/gbe/evw290.

Steane, DA

, Potts, BM

, McLean, EH, Collins, L, Holland, BR

, Prober, SM, Stock, WD, Vaillancourt, RE

and Byrne, M 2017 , 'Genomic scans across three eucalypts suggest that adaptation to aridity is a genome-wide phenomenon' , Genome Biology and Evolution, vol. 9, no. 2 , pp. 253-265 , doi: https://doi.org/10.1093/gbe/evw290.

Whittock, SP, Steane, DA, Vaillancourt, RE and Potts, BM 2003 , 'Molecular evidence shows that the tropical boxes (Eucalyptus subgenus minutifructus) are over-ranked' , Transactions of the Royal Society of South Australia, vol. 1217, no. 1 , pp. 27-32 .

Yost, JM, Wise, SL, Love, NLR, Steane, DA

, Jones, RC

, Ritter, MK and Potts, BM

2021 , 'Origins, diversity and naturalization of Eucalyptus globulus (Myrtaceae) in California' , Forests, vol. 12, no. 8 , pp. 1-18 , doi: https://doi.org/10.3390/f12081129.

Kelarev, A, Kang, BH and Steane, DA 2006 , 'Clustering algorithms for ITS sequence data with alignment metrics', in Abdul Sattar and Byeong Ho Kang (eds.), AI 2006: Advances in Artificial Intelligence , Lecture Notes in Computer Science (4304) , Springer Berlin/Heidelberg, pp. 1027-1031.

Potts, BM, Vaillancourt, RE, Jordan, GJ, Dutkowski, GW, da Costa e Silva, J, McKinnon, GE, Steane, DA, Volker, PW, Lopez, G, Apiolaza, L, Li, Y, Marques, CMP and Borralho, NMG 2004 , 'Exploration of the Eucalyptus Globulus gene pool', in Nuno M.G. Borralho and J.S. Periera and C. Marques and J. Coutinho and M. Madeira and M. Tomé (eds.), Eucalyptus in a changing world: Proc. IUFRO Conf., Aveiro, 11-15 Oct. 2004 , RAIZ, Instituto Investigação de Floresta e Papel, Portugal, Portugal, pp. 116-122.

Kelarev, A, Kang, BH and Steane, DA 2006 , 'Clustering Algorithms for ITS Sequence Data with Alignment Metrics', paper presented at the The 19th Australian Joint Conference on Artificial Intelligence, 4-8 Dec 2003, Hobart, Australia.

Potts, BM, Vaillancourt, RE, Jordan, GJ, Dutkowski, GW, da Costa e Silva, J, McKinnon, GE, Steane, DA, Volker, PW, Lopez, G, Apiolza, L, Li, Yongjun, Marques, C and Borralho, NMG 2004 , 'Exploration of the Eucalyptus globulus gene pool', paper presented at the Eucalyptus in a Changing World. Proc. of IUFRO Conf., Aveiro 11-15 October 2004.

Potts, BM, Vaillancourt, RE, Jordan, GJ, Dutkowski, GW, da Costa e Silva, J, McKinnon, GE, Steane, DA, Volker, PW, Lopez, GA, Apiolaza, L, Li, J, Marques, CMP and Borralho, NMG 2004 , 'Exploration of the Eucalyptus globulus gene pool', paper presented at the Eucalyptus in a changing world. International IUFRO Conference, 11-15 Oct 2004, Aveiro, Portugal.

Gauli, A, Vaillancourt, RE, Bailey, T, Steane, DA and Potts, BM 2015 , Deposited data for Gauli et al. paper in Tree Genetics and Genomes 2016.

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